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Gembloux Agro-Bio Tech (GxABT)
Gembloux Agro-Bio Tech (GxABT)
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Role of Exostosin and Rab-Gtpase proteins in cell homeostasis

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Depret, François ULiège
Promotor(s) : Twizere, Jean-Claude ULiège
Date of defense : 27-Aug-2018 • Permalink : http://hdl.handle.net/2268.2/5148
Details
Title : Role of Exostosin and Rab-Gtpase proteins in cell homeostasis
Translated title : [fr] Role des protéines exostosines et Rab GTPases dans l'homéostasie de la cellule
Author : Depret, François ULiège
Date of defense  : 27-Aug-2018
Advisor(s) : Twizere, Jean-Claude ULiège
Committee's member(s) : Delvigne, Frank ULiège
Fauconnier, Marie-Laure ULiège
Fickers, Patrick ULiège
Sindic, Marianne ULiège
Twizere, Jean-Claude ULiège
Language : English
Number of pages : 68
Keywords : [en] NOTCH1
[en] Rab GTPases
[en] Exostosin
Discipline(s) : Life sciences > Biochemistry, biophysics & molecular biology
Funders : GIGA-Laboratory of protein signaling and interactions (University of Liège)
Microbial processes and interactions (MiPI, TERRA, Gembloux Agro-Bio Tech)
Target public : Researchers
Professionals of domain
Institution(s) : Université de Liège, Liège, Belgique
Degree: Master en bioingénieur : chimie et bioindustries, à finalité spécialisée
Faculty: Master thesis of the Gembloux Agro-Bio Tech (GxABT)

Abstract

[en] Exostosin is a family of type II transmembrane glycosyltransferase enzymes, containing five members:
EXT1, EXT2, EXTL1, EXTL2, EXTL3. These proteins are linked with heparan sulfate chains polymerization on
heparan sulfate proteoglycans, but recent advances demonstrated that some of these members exhibit
novel functions. Rab GTPases family is composed of at least 60 members of membrane-bound proteins that
regulate many steps of membrane trafficking. The aim of this study is to analyse potential interplay between EXT and Rab family members in Notch signaling. Rab GTPases were cloned in an expression vector and
transfected in human cells to observe their potential effect on NOTCH1 expression. Cell lines silenced for
each EXT member were created and their characteristics assessed. EXT1 and EXT2 protein production in
Yarrowia lipolytica was also considered to perform in vitro analyzes using purified proteins. As a result, a
functional library of Rab GTPases in expression vector was created, verified, and is ready to be used for
transfection experiments. Stable knockdown cell lines were successfully created for EXT genes, a reduction
of NOTCH1 expression was observed when EXT2 or EXTL3 were silenced, probably due to modification of
the trafficking mechanism and/or genetic co-regulation. Protein production did not show significant
results. These results suggest a new model for increased NOTCH1 trafficking: overexpression of EXT2 and
Rab10 with simultaneous silencing of EXT1. Rab GTPases were cloned in an expression vector and
transfected in human cells to observe their potential effect on NOTCH1 expression. Cell lines silenced for
each EXT member were created and their characteristics assessed. EXT1 and EXT2 protein production in
Yarrowia lipolytica was also considered to perform in vitro analyzes using purified proteins. As a result, a
functional library of Rab GTPases in expression vector was created, verified, and is ready to be used for
transfection experiments. Stable knockdown cell lines were successfully created for EXT genes, a reduction
of NOTCH1 expression was observed when EXT2 or EXTL3 were silenced, probably due to modification of
the trafficking mechanism and/or genetic co-regulation. Protein production did not show significant
results. These results suggest a new model for increased NOTCH1 trafficking: overexpression of EXT2 and
Rab10 with simultaneous silencing of EXT1.


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Author

  • Depret, François ULiège Université de Liège > Gembloux Agro-Bio Tech

Promotor(s)

Committee's member(s)

  • Delvigne, Frank ULiège Université de Liège - ULiège > Agronomie, Bio-ingénierie et Chimie (AgroBioChem) > Microbial, food and biobased technologies
    ORBi View his publications on ORBi
  • Fauconnier, Marie-Laure ULiège Université de Liège - ULiège > Agronomie, Bio-ingénierie et Chimie (AgroBioChem) > Chimie des agro-biosystèmes
    ORBi View his publications on ORBi
  • Fickers, Patrick ULiège Université de Liège - ULiège > Agronomie, Bio-ingénierie et Chimie (AgroBioChem) > Microbial, food and biobased technologies
    ORBi View his publications on ORBi
  • Sindic, Marianne ULiège Université de Liège - ULiège > Agronomie, Bio-ingénierie et Chimie (AgroBioChem) > Chimie des agro-biosystèmes
    ORBi View his publications on ORBi
  • Twizere, Jean-Claude ULiège Université de Liège - ULiège > Agronomie, Bio-ingénierie et Chimie (AgroBioChem) > Microbial, food and biobased technologies
    ORBi View his publications on ORBi
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