Role of Exostosin and Rab-Gtpase proteins in cell homeostasis
Depret, François
Promotor(s) : Twizere, Jean-Claude
Date of defense : 27-Aug-2018 • Permalink : http://hdl.handle.net/2268.2/5148
Details
Title : | Role of Exostosin and Rab-Gtpase proteins in cell homeostasis |
Translated title : | [fr] Role des protéines exostosines et Rab GTPases dans l'homéostasie de la cellule |
Author : | Depret, François |
Date of defense : | 27-Aug-2018 |
Advisor(s) : | Twizere, Jean-Claude |
Committee's member(s) : | Delvigne, Frank
Fauconnier, Marie-Laure Fickers, Patrick Sindic, Marianne Twizere, Jean-Claude |
Language : | English |
Number of pages : | 68 |
Keywords : | [en] NOTCH1 [en] Rab GTPases [en] Exostosin |
Discipline(s) : | Life sciences > Biochemistry, biophysics & molecular biology |
Funders : | GIGA-Laboratory of protein signaling and interactions (University of Liège) Microbial processes and interactions (MiPI, TERRA, Gembloux Agro-Bio Tech) |
Target public : | Researchers Professionals of domain |
Institution(s) : | Université de Liège, Liège, Belgique |
Degree: | Master en bioingénieur : chimie et bioindustries, à finalité spécialisée |
Faculty: | Master thesis of the Gembloux Agro-Bio Tech (GxABT) |
Abstract
[en] Exostosin is a family of type II transmembrane glycosyltransferase enzymes, containing five members:
EXT1, EXT2, EXTL1, EXTL2, EXTL3. These proteins are linked with heparan sulfate chains polymerization on
heparan sulfate proteoglycans, but recent advances demonstrated that some of these members exhibit
novel functions. Rab GTPases family is composed of at least 60 members of membrane-bound proteins that
regulate many steps of membrane trafficking. The aim of this study is to analyse potential interplay between EXT and Rab family members in Notch signaling. Rab GTPases were cloned in an expression vector and
transfected in human cells to observe their potential effect on NOTCH1 expression. Cell lines silenced for
each EXT member were created and their characteristics assessed. EXT1 and EXT2 protein production in
Yarrowia lipolytica was also considered to perform in vitro analyzes using purified proteins. As a result, a
functional library of Rab GTPases in expression vector was created, verified, and is ready to be used for
transfection experiments. Stable knockdown cell lines were successfully created for EXT genes, a reduction
of NOTCH1 expression was observed when EXT2 or EXTL3 were silenced, probably due to modification of
the trafficking mechanism and/or genetic co-regulation. Protein production did not show significant
results. These results suggest a new model for increased NOTCH1 trafficking: overexpression of EXT2 and
Rab10 with simultaneous silencing of EXT1. Rab GTPases were cloned in an expression vector and
transfected in human cells to observe their potential effect on NOTCH1 expression. Cell lines silenced for
each EXT member were created and their characteristics assessed. EXT1 and EXT2 protein production in
Yarrowia lipolytica was also considered to perform in vitro analyzes using purified proteins. As a result, a
functional library of Rab GTPases in expression vector was created, verified, and is ready to be used for
transfection experiments. Stable knockdown cell lines were successfully created for EXT genes, a reduction
of NOTCH1 expression was observed when EXT2 or EXTL3 were silenced, probably due to modification of
the trafficking mechanism and/or genetic co-regulation. Protein production did not show significant
results. These results suggest a new model for increased NOTCH1 trafficking: overexpression of EXT2 and
Rab10 with simultaneous silencing of EXT1.
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